diff options
Diffstat (limited to 'sci-biology/primer3/primer3-2.3.7.ebuild')
-rw-r--r-- | sci-biology/primer3/primer3-2.3.7.ebuild | 48 |
1 files changed, 48 insertions, 0 deletions
diff --git a/sci-biology/primer3/primer3-2.3.7.ebuild b/sci-biology/primer3/primer3-2.3.7.ebuild new file mode 100644 index 000000000000..9a129f5663b0 --- /dev/null +++ b/sci-biology/primer3/primer3-2.3.7.ebuild @@ -0,0 +1,48 @@ +# Copyright 1999-2016 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=6 + +inherit eutils toolchain-funcs + +DESCRIPTION="Primer Design for PCR reactions" +HOMEPAGE="http://primer3.sourceforge.net/" +SRC_URI="mirror://sourceforge/project/${PN}/${PN}/${PV}/${P}.tar.gz" + +SLOT="0" +LICENSE="GPL-2" +IUSE="" +KEYWORDS="~amd64 ~ppc ~ppc64 ~sparc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris" + +DEPEND="dev-lang/perl" +RDEPEND="" + +PATCHES=( "${FILESDIR}"/${PN}-2.3.4-buildsystem.patch ) + +src_prepare() { + default + if [[ ${CHOST} == *-darwin* ]]; then + sed -e "s:LIBOPTS ='-static':LIBOPTS =:" -i Makefile || die + fi + + tc-export CC CXX AR RANLIB +} + +src_compile() { + emake -C src +} + +src_test () { + emake -C test | tee "${T}"/test.log + grep -q "\[FAILED\]" && die "test failed. See "${T}"/test.log" +} + +src_install () { + dobin src/{long_seq_tm_test,ntdpal,oligotm,primer3_core} + dodoc src/release_notes.txt example + insinto /opt/primer3_config + doins -r src/primer3_config/* primer3*settings.txt + docinto html + dodoc primer3_manual.htm +} |