diff options
Diffstat (limited to 'sci-biology/psipred/files/3.1-Makefile.patch')
| -rw-r--r-- | sci-biology/psipred/files/3.1-Makefile.patch | 38 |
1 files changed, 38 insertions, 0 deletions
diff --git a/sci-biology/psipred/files/3.1-Makefile.patch b/sci-biology/psipred/files/3.1-Makefile.patch new file mode 100644 index 000000000000..0c70b6868565 --- /dev/null +++ b/sci-biology/psipred/files/3.1-Makefile.patch @@ -0,0 +1,38 @@ +diff --git a/src/Makefile b/src/Makefile +index abed8af..26061fa 100644 +--- a/src/Makefile ++++ b/src/Makefile +@@ -6,9 +6,9 @@ + #### CFLAGS Flags to pass to C compiler. + + INCDIR = . +-CC = cc ++CC ?= gcc + +-CFLAGS = -O ++CFLAGS ?= -O2 + LIBS = -lm + + all: psipred psipass2 chkparse seq2mtx pfilt +@@ -20,16 +20,16 @@ clean: + /bin/rm -f psipred psipass2 chkparse seq2mtx pfilt + + psipred: sspred_avpred.c ssdefs.h sspred_net.h +- $(CC) $(CFLAGS) sspred_avpred.c $(LIBS) -o psipred ++ $(CC) $(CFLAGS) $(LDFLAGS) sspred_avpred.c $(LIBS) -o psipred + + psipass2: sspred_hmulti.c ssdefs.h sspred_net2.h +- $(CC) $(CFLAGS) sspred_hmulti.c $(LIBS) -o psipass2 ++ $(CC) $(CFLAGS) $(LDFLAGS) sspred_hmulti.c $(LIBS) -o psipass2 + + chkparse: chkparse.c +- $(CC) $(CFLAGS) chkparse.c $(LIBS) -o chkparse ++ $(CC) $(CFLAGS) $(LDFLAGS) chkparse.c $(LIBS) -o chkparse + + seq2mtx: seq2mtx.c +- $(CC) $(CFLAGS) seq2mtx.c $(LIBS) -o seq2mtx ++ $(CC) $(CFLAGS) $(LDFLAGS) seq2mtx.c $(LIBS) -o seq2mtx + + pfilt: pfilt.c +- $(CC) $(CFLAGS) pfilt.c $(LIBS) -o pfilt ++ $(CC) $(CFLAGS) $(LDFLAGS) pfilt.c $(LIBS) -o pfilt |