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Diffstat (limited to 'sci-biology/seaview/seaview-4.5.4.ebuild')
-rw-r--r--sci-biology/seaview/seaview-4.5.4.ebuild76
1 files changed, 0 insertions, 76 deletions
diff --git a/sci-biology/seaview/seaview-4.5.4.ebuild b/sci-biology/seaview/seaview-4.5.4.ebuild
deleted file mode 100644
index 33ee6f65ccbd..000000000000
--- a/sci-biology/seaview/seaview-4.5.4.ebuild
+++ /dev/null
@@ -1,76 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-inherit eutils multilib toolchain-funcs
-
-DESCRIPTION="A graphical multiple sequence alignment editor"
-HOMEPAGE="http://pbil.univ-lyon1.fr/software/seaview.html"
-SRC_URI="ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/${PN}_${PV}.tar.gz"
-
-LICENSE="public-domain"
-SLOT="0"
-KEYWORDS="amd64 x86"
-IUSE="+xft"
-
-CDEPEND="
- sys-libs/zlib
- x11-libs/fltk:1
- x11-libs/libX11
- xft? (
- x11-libs/libXft
- x11-libs/fltk:1[xft] )"
-RDEPEND="${CDEPEND}
- sci-biology/clustalw
- || ( sci-libs/libmuscle sci-biology/muscle )
- sci-biology/phyml"
-DEPEND="${CDEPEND}
- virtual/pkgconfig"
-
-S="${WORKDIR}/${PN}"
-
-src_prepare() {
- # respect CXXFLAGS (package uses them as CFLAGS)
- sed \
- -e "s:^CC.*:CC = $(tc-getCC):" \
- -e "s:^CXX.*:CXX = $(tc-getCXX):" \
- -e "s:\$(OPT):${CXXFLAGS}:" \
- -e "s:^OPT:#OPT:" \
- -e "s:^FLTK = .*$:FLTK = ${EPREFIX}/usr/include/fltk-1:" \
- -e "s:^#IFLTK .*:IFLTK = $(fltk-config --use-images --cflags):" \
- -e "s:^#LFLTK .*:LFLTK = $(fltk-config --use-images --ldflags):" \
- -e "s:^USE_XFT:#USE_XFT:" \
- -e "s:^#HELPFILE:HELPFILE:" \
- -e "s:/usr/share/doc/seaview/seaview.htm:${EPREFIX}/usr/share/seaview/seaview.htm:" \
- -e "s:^#PHYMLNAME:PHYMLNAME:" \
- -e 's:-lXinerama::g' \
- -e 's:-lpng::g' \
- -e 's:-ljpeg::g' \
- -e 's:-lfontconfig::g' \
- -i Makefile || die "sed failed while editing Makefile"
-
- if use xft; then
- sed \
- -e "s:^#USE_XFT .*:USE_XFT = -DUSE_XFT $($(tc-getPKG_CONFIG) --cflags xft):" \
- -e "s:-lXft:$($(tc-getPKG_CONFIG) --libs xft):" \
- -i Makefile || die "sed failed while editing Makefile to enable xft"
- else
- sed -i -e "s:-lXft::" Makefile || die
- fi
-}
-
-src_install() {
- dobin seaview
-
- # /usr/share/seaview/seaview.html is hardcoded in the binary, see Makefile
- insinto /usr/share/seaview
- doins example.nxs seaview.html
-
- insinto /usr/share/seaview/images
- doins seaview.xpm
-
- make_desktop_entry seaview Seaview
-
- doman seaview.1
-}