| Commit message (Collapse) | Author | Age | Files | Lines | |
|---|---|---|---|---|---|
| * | sci-libs/dealii: do not remove FindLAPACK.cmake module from build environment |   Matthias Maier | 2016-04-22 | 5 | -5/+30 |
| | | | | | | | | | deal.II uses a FindLAPACK.cmake file to call into the system FindLAPACK.cmake module and to do additional setup - do not remove it during the prepare stage. Package-Manager: portage-2.2.26 | ||||
| * | sci-libs/trilinos: Version bump to 12.6.2 | Matthias Maier | 2016-04-22 | 3 | -0/+860 |
| | | | | | Package-Manager: portage-2.2.26 | ||||
| * | sci-mathematics/petsc: version bump to 3.6.4, fix bug #559172 | Matthias Maier | 2016-04-21 | 2 | -0/+253 |
| | | | | | Package-Manager: portage-2.2.26 | ||||
| * | sci-mathematics/petsc: remove obsolete elog message pointing to bug #53386 | Matthias Maier | 2016-04-21 | 4 | -24/+0 |
| | | | | | Package-Manager: portage-2.2.26 | ||||
| * | sci-libs/dealii: version bump to 8.4.1 | Matthias Maier | 2016-04-21 | 3 | -2/+122 |
| | | | | | Package-Manager: portage-2.2.26 | ||||
| * | sci-biology/hts-python: new package providing an alternative to pysam |   Martin Mokrejš | 2016-04-20 | 2 | -0/+34 |
| | | | | | Package-Manager: portage-2.2.28 | ||||
| * | sci-biology/tablet-bin: version bump; added coveragestats.py (requires dos2unix) | Martin Mokrejš | 2016-04-20 | 2 | -2/+6 |
| | | | | | Package-Manager: portage-2.2.28 | ||||
| * | Merge remote-tracking branch 'github/master' |   Marius Brehler | 2016-04-13 | 51 | -1406/+1 |
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| | * | sci-biology/pysam: Remove old, latest 0.9.0 in main tree |   David Seifert | 2016-04-10 | 4 | -85/+0 |
| | | | | | | | | | Package-Manager: portage-2.2.28 | ||||
| | * | sci-biology/tophat: remove all ebuilds, latest version in main tree | David Seifert | 2016-04-09 | 7 | -348/+0 |
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| | * | removed all healpix packages now in main tree |   Sébastien Fabbro | 2016-04-07 | 15 | -278/+0 |
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| | * | Merge branch 'master' of https://github.com/gentoo-science/sci | Sébastien Fabbro | 2016-04-04 | 121 | -730/+2167 |
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| | | * | cluster to fsl_cluster rename |   Horea Christian | 2016-04-04 | 1 | -1/+1 |
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * sci-biology/fsl: trying to resolve namespace conflict with graphviz Package-Manager: portage-2.2.28 * sci-biology/fsl: corrected fix for naming collision Package-Manager: portage-2.2.28 | ||||
| | | * | sci-biology/abyss: moved to main tree | David Seifert | 2016-04-03 | 13 | -367/+0 |
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| | | * | sci-biology/abyss: fix automagic haskell deps, bug #534412 |   Sergei Trofimovich | 2016-04-03 | 2 | -4/+22 |
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | It's a ::gentoo change a50e1769e82e28dedb16083ac9136f17f9af2297 Reported-by: Toralf Förster Bug: https://bugs.gentoo.org/534412 Package-Manager: portage-2.2.28 | ||||
| | * | | Merge branch 'master' of https://github.com/gentoo-science/sci | Sébastien Fabbro | 2016-03-22 | 7 | -9/+87 |
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| | * | | | dev-python/gammapy: in main tree | Sébastien Fabbro | 2016-03-21 | 2 | -77/+0 |
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| | * | | | dev-python/emcee: in main tree | Sébastien Fabbro | 2016-03-21 | 4 | -78/+0 |
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| | * | | | Merge branch 'master' of https://github.com/gentoo-science/sci | Sébastien Fabbro | 2016-03-21 | 1 | -3/+2 |
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| | * | | | | dev-python/astroquery: now in main tree | Sébastien Fabbro | 2016-03-16 | 5 | -190/+0 |
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| * | | | | | sci-biology/repeatmasker: add DEPENDency on dev-perl/Text-Soundex as it now ↵ | Martin Mokrejš | 2016-04-12 | 1 | -3/+3 |
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | landed the main repo (was bug #566740) Package-Manager: portage-2.2.28 | ||||
| * | | | | | sci-biology/trinityrnaseq: use 'rm -rf' when deleting a subdirectory with ↵ | Martin Mokrejš | 2016-04-11 | 3 | -3/+3 |
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | bundled GAL-0.2.1 Package-Manager: portage-2.2.28 | ||||
| * | | | | | sci-biology/trinityrnaseq: adjust to sci-biology/samtools using SLOTs now; | Martin Mokrejš | 2016-04-11 | 4 | -2/+79 |
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | installation suffers file collision on /usr/bin/fasta_tool , see usptream github issue #126 Package-Manager: portage-2.2.28 | ||||
| * | | | | | dev-perl/Text-Graph: new package | Martin Mokrejš | 2016-04-11 | 3 | -0/+34 |
| | | | | | | | | | | | | | | | | | | | | | Package-Manager: portage-2.2.28 | ||||
| * | | | | | dev-perl/Text-RecordParser: new package | Martin Mokrejš | 2016-04-11 | 3 | -0/+33 |
| | | | | | | | | | | | | | | | | | | | | | Package-Manager: portage-2.2.28 | ||||
| * | | | | | sci-biology/pysamstats: new package | Martin Mokrejš | 2016-04-11 | 3 | -0/+36 |
| | | | | | | | | | | | | | | | | | | | | | Package-Manager: portage-2.2.28 | ||||
| * | | | | | sci-biology/AlignGraph: improve package DESCR | Martin Mokrejš | 2016-04-11 | 1 | -1/+1 |
| | | | | | | | | | | | | | | | | | | | | | Package-Manager: portage-2.2.28 | ||||
| * | | | | | sci-biology/megahit: new package | Martin Mokrejš | 2016-04-10 | 2 | -0/+46 |
| | | | | | | | | | | | | | | | | | | | | | Package-Manager: portage-2.2.28 | ||||
| * | | | | | sci-biology/oases: new package | Martin Mokrejš | 2016-04-10 | 5 | -0/+102 |
| | | | | | | | | | | | | | | | | | | | | | Package-Manager: portage-2.2.28 | ||||
| * | | | | | sci-biology/reaper: new package | Martin Mokrejš | 2016-04-10 | 3 | -0/+47 |
| | | | | | | | | | | | | | | | | | | | | | Package-Manager: portage-2.2.28 | ||||
| * | | | | | sci-biology/snpomatic: new package | Martin Mokrejš | 2016-04-10 | 2 | -0/+46 |
| | | | | | | | | | | | | | | | | | | | | | Package-Manager: portage-2.2.28 | ||||
| * | | | | | sci-biology/somatic-sniper: new package | Martin Mokrejš | 2016-04-10 | 3 | -0/+42 |
| | | | | | | | | | | | | | | | | | | | | | Package-Manager: portage-2.2.28 | ||||
| * | | | | | sci-biology/gemini: new package | Martin Mokrejš | 2016-04-10 | 2 | -0/+41 |
| | | | | | | | | | | | | | | | | | | | | | Package-Manager: portage-2.2.28 | ||||
| * | | | | | sci-biology/bfast: new package | Martin Mokrejš | 2016-04-10 | 3 | -0/+33 |
| | | | | | | | | | | | | | | | | | | | | | Package-Manager: portage-2.2.28 | ||||
| * | | | | | sci-biology/smalt: new package | Martin Mokrejš | 2016-04-10 | 1 | -2/+2 |
| | | | | | | | | | | | | | | | | | | | | | Package-Manager: portage-2.2.28 | ||||
| * | | | | | sci-biology/iCORN2: new package with bundled gatk and picard jar files | Martin Mokrejš | 2016-04-10 | 3 | -0/+71 |
| | | | | | | | | | | | | | | | | | | | | | Package-Manager: portage-2.2.28 | ||||
| * | | | | | sci-biology/Scaffolder-evaluation: new package | Martin Mokrejš | 2016-04-10 | 2 | -0/+46 |
| | | | | | | | | | | | | | | | | | | | | | Package-Manager: portage-2.2.28 | ||||
| * | | | | | sci-biology/Fastaq: new package | Martin Mokrejš | 2016-04-10 | 2 | -0/+33 |
| | | | | | | | | | | | | | | | | | | | | | Package-Manager: portage-2.2.28 | ||||
| * | | | | | sci-biology/assembly-stats: new package | Martin Mokrejš | 2016-04-10 | 2 | -0/+34 |
| | | | | | | | | | | | | | | | | | | | | | Package-Manager: portage-2.2.28 | ||||
| * | | | | | sci-biology/bamtools: try to document roughly what jsoncpp version is likely ↵ | Martin Mokrejš | 2016-04-10 | 1 | -0/+1 |
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | bundled Package-Manager: portage-2.2.28 | ||||
| * | | | | | sci-biology/sga: compilation against bamtools does not work, see link | Martin Mokrejš | 2016-04-10 | 1 | -0/+1 |
| | | | | | | | | | | | | | | | | | | | | | Package-Manager: portage-2.2.28 | ||||
| * | | | | | sci-biology/sga: move optional runtime deps to RDEPEND | Martin Mokrejš | 2016-04-10 | 1 | -2/+2 |
| | | | | | | | | | | | | | | | | | | | | | Package-Manager: portage-2.2.28 | ||||
| * | | | | | sci-biology/SPAdes: improve description | Martin Mokrejš | 2016-04-08 | 1 | -1/+1 |
| | | | | | | | | | | | | | | | | | | | | | Package-Manager: portage-2.2.28 | ||||
| * | | | | | sci-biology/edena: improve package description | Martin Mokrejš | 2016-04-08 | 1 | -1/+1 |
| | | | | | | | | | | | | | | | | | | | | | Package-Manager: portage-2.2.28 | ||||
| * | | | | | sci-biology/sga: improve package description | Martin Mokrejš | 2016-04-08 | 1 | -2/+2 |
| | | | | | | | | | | | | | | | | | | | | | Package-Manager: portage-2.2.28 | ||||
| * | | | | | sci-biology/cap3-bin: drop KEYWORDS | Martin Mokrejš | 2016-04-08 | 2 | -2/+2 |
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| * | | | | | sci-biology/cap3-bin: drop wrong LICENSE | Martin Mokrejš | 2016-04-08 | 2 | -2/+2 |
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| * | | | | | sci-biology/arachne: improve package description | Martin Mokrejš | 2016-04-08 | 1 | -1/+1 |
| | | | | | | | | | | | | | | | | | | | | | Package-Manager: portage-2.2.28 | ||||
| * | | | | | sci-biology/arachne: improve package description | Martin Mokrejš | 2016-04-08 | 1 | -1/+1 |
| | | | | | | | | | | | | | | | | | | | | | Package-Manager: portage-2.2.28 | ||||
| * | | | | | sci-biology/SSAKE: improve package description | Martin Mokrejš | 2016-04-08 | 1 | -1/+1 |
| | | | | | | | | | | | | | | | | | | | | | Package-Manager: portage-2.2.28 | ||||
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