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* sci-biology/stringtie: version bump, accepted new upstream patch, worksMartin Mokrejs2018-06-273-75/+70
* sci-biology/samri: new packageHorea Christian2018-06-264-0/+136
* sci-biology/salmon: fix variablenamesMartin Mokrejs2018-06-263-2/+15
* sci-biology/salmon: fix testsMartin Mokrejs2018-06-263-2/+14
* sci-biology/stringtie: drop KEYWORDS as it does not compileMartin Mokrejs2018-06-261-1/+2
* sci-biology/gclib: removed as uselessMartin Mokrejs2018-06-264-79/+0
* sci-biology/stringtie: keep modified bundled copy of samtools-0.1.18Martin Mokrejs2018-06-262-14/+10
* sci-biology/gffread: fetch gclib and use during compilationMartin Mokrejs2018-06-263-6/+9
* sci-biology/gffcompare: new packageMartin Mokrejs2018-06-264-0/+124
* sci-biology/afni: Added unstable x86 keywordHorea Christian2018-06-261-1/+1
* sci-biology/ants: Version bump and improvementsHorea Christian2018-06-264-12/+47
* sci-biology/stringtie: patch cleanupMartin Mokrejs2018-06-261-34/+28
* sci-biology/gffread: new packageMartin Mokrejs2018-06-264-0/+70
* sci-biology/stringtie: document bundled sci-biology/gclib copyMartin Mokrejs2018-06-261-2/+5
* sci-biology/gclib: new packageMartin Mokrejs2018-06-264-0/+79
* sci-biology/stringtie: drop bundled samtools-0.18.1, fix MakefileMartin Mokrejs2018-06-252-1/+130
* sci-biology/salmon: add missing DEPENDency on app-arch/unzipMartin Mokrejs2018-06-252-0/+2
* sci-biology/salmon: bring -9999 in sync with 0.10.2.ebuildMartin Mokrejs2018-06-252-38/+10
* sci-biology/salmon: drop calls to curl, fix libdirMartin Mokrejs2018-06-255-10/+249
* sci-biology/salmon: drop deps on static boost, some ebuild cleanupMartin Mokrejs2018-06-2511-135/+94
* sci-biology/afni: new packageHorea Christian2018-06-254-0/+154
* sci-biology/salmon: bump version of required dev-cpp/tbbMartin Mokrejs2018-06-242-3/+3
* sci-biology/salmon: add URL linkMartin Mokrejs2018-06-241-0/+1
* sci-biology/salmon: version bump, attempts to get boost picked upMartin Mokrejs2018-06-246-8/+34
* sci-biology/bwa: version bumpMartin Mokrejs2018-06-244-0/+73
* sci-biology/mouse-brain-atlases: new packageHorea Christian2018-06-243-0/+38
* sci-biology/samri_bindata: new packageHorea Christian2018-06-243-0/+37
* sci-biology/bru2nii: version bumpHorea Christian2018-06-232-0/+33
* drop due to broken depsJustin Lecher2018-06-213-54/+0
* sci-biology/trimmomatic: version bumpMartin Mokrejs2018-06-062-4/+4
* sci-biology/nilearn: new versionsHorea Christian2018-06-054-11/+48
* sci-biology/dipy: version bump and improved depsHorea Christian2018-05-233-3/+43
* sci-biology/SPAdes: version bump, drop oldMartin Mokrejs2018-05-174-110/+14
* sci-biology/kat: removing patches for 2.4.1 versionMartin Mokrejs2018-05-082-58/+0
* sci-biology/kat: various fixes for issue #867François Bissey2018-05-0711-229/+308
* sci-biology/quorum: drop oldMartin Mokrejs2018-05-022-29/+0
* sci-biology/jellyfish: version bump and a few tweaksMartin Mokrejs2018-05-023-5/+4
* sci-biology/bamql: add live ebuildMartin Mokrejs2018-05-011-0/+28
* sci-biology/jellyfish: install bundled PDF manualMartin Mokrejs2018-04-233-3/+54
* sci-biology/kat: properly install python filesMartin Mokrejs2018-04-233-105/+59
* sci-biology/megahit: respect cuda USE flagMartin Mokrejs2018-04-232-6/+24
* sci-biology/SOAPdenovo2: Respect CC/CXX/CFLAGS/CXXFLAGS variablesMartin Mokrejs2018-04-233-9/+216
* sci-biology/kat: add missing DEPENDencyMartin Mokrejs2018-04-223-5/+7
* sci-biology/BlastToSam: move the -9999 ebuild to 1.1 versionMartin Mokrejs2018-04-221-5/+7
* sci-biology/samstat: version bumpMartin Mokrejs2018-04-222-14/+4
* sci-biology/kat: improve -8888 ebuildMartin Mokrejs2018-04-226-250/+132
* sci-biology/kat: remove lines commented outMartin Mokrejs2018-04-221-12/+0
* sci-biology/kat: ignore site-wide boost-build/site-config.jamMartin Mokrejs2018-04-225-6/+343
* sci-biology/kat: execute the build_boost.sh and autogen.sh logicMartin Mokrejs2018-04-222-5/+31
* sci-biology/sailfish: update comments with URLsMartin Mokrejs2018-04-222-5/+5