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* sci-biology/MaSuRCA: add dependency on sci-biology/quorumMartin Mokrejš2014-07-041-1/+2
* sci-biology/clview: add dependency on =x11-libs/fox-1.6*Martin Mokrejš2014-07-043-3/+9
* sci-biology/caftools: clarified package descriptionMartin Mokrejš2014-07-042-3/+6
* sci-biology/emboss-6.3.1_p4-r2: added a patch for 'undefined reference to c_p...Martin Mokrejš2014-07-043-0/+20
* sci-biology/Atlas-Link: noted dependence, see bug #516366Martin Mokrejš2014-07-044-0/+46
* sci-biology/gap2caf: remove -rpath-link from src/MakefileMartin Mokrejš2014-07-042-2/+6
* sci-biology/jellyfish: new package, worksMartin Mokrejš2014-07-034-0/+38
* sci-biology/tablet-bin: version bump; updated the licenseMartin Mokrejš2014-07-033-0/+104
* sci-biology/tablet: cleaned up the ebuilds, they compile and install but the ...Martin Mokrejš2014-07-035-127/+96
* sci-biology/prot4EST: remove version numbers from the installed binary filenameMartin Mokrejš2014-06-271-0/+1
* sci-biology/BamView: fixed java depsMartin Mokrejš2014-06-271-2/+3
* sci-biology/VelevtOptimiser: dropping perl version requirement as I am unbale...Martin Mokrejš2014-06-271-1/+1
* sci-biology/ncbi-tools++-12.0.0: improved comment textMartin Mokrejš2014-06-261-1/+4
* sci-biology/ncbi-tools++: so require media-libs/mesa[osmesa] for USE=mesaMartin Mokrejš2014-06-263-3/+3
* sci-biology/ncbi-tools++: reworked patchMartin Mokrejš2014-06-261-6/+6
* sci-biology/ncbi-tools++: bring back USE=mesa although it is about OSMesaMartin Mokrejš2014-06-263-11/+9
* sci-biology/ncbi-tools++: fix 'make install if USE=pchMartin Mokrejš2014-06-262-0/+12
* sci-biology/ncbi-tools++: dropped USE=ftds as it is useless and recommended b...Martin Mokrejš2014-06-263-24/+17
* sci-biology/ncbi-tools++-12.0.0: drop forgotten IUSE=sslMartin Mokrejš2014-06-261-1/+1
* sci-biology/ncbi-tools++-12.0.0: added a blocker with sci-biology/sra_sdkMartin Mokrejš2014-06-261-0/+1
* sci-biology/ncbi-tools++-12.0.0: more places where to drop ':%=%'Martin Mokrejš2014-06-261-1/+1
* sci-biology/ncbi-tools++-12.0.0: more entries to ncbi-tools++-12.0.0-drop-STA...Martin Mokrejš2014-06-261-0/+22
* sci-biology/ncbi-tools++-12.0.0: added the patch istelf dropping :%=% from LI...Martin Mokrejš2014-06-261-0/+22
* sci-biology/ncbi-tools++-12.0.0: dropping :%=% from LIB settingsMartin Mokrejš2014-06-261-0/+1
* sci-biology/ncbi-tools++-9.0.0*: dropped altogether openssl-related USE flags...Martin Mokrejš2014-06-262-13/+5
* sci-biology/ncbi-tools++-12.0.0: dropped altogether openssl-related USE flags...Martin Mokrejš2014-06-261-3/+1
* sci-biology/barrnap: working ebuild although installing a pre-compiled binary...Martin Mokrejš2014-06-262-0/+33
* sci-biology/ncbi-tools++-12.0.0: cleanup comments and shutdown a false alarm ...Martin Mokrejš2014-06-261-2/+1
* sci-biology/ncbi-tools++-12.0.0: dropped unneeded patchMartin Mokrejš2014-06-261-1660/+0
* sci-biology/ncbi-tools++-12.0.0: dropped unneeded patches, added direct depen...Martin Mokrejš2014-06-263-67/+2
* sci-biology/ncbi-tools++-12.0.0: re-added update patch to configure so that w...Martin Mokrejš2014-06-252-44264/+67
* sci-biology/ncbi-tools++-12.0.0: install colliding files under a name suffixe...Martin Mokrejš2014-06-251-2/+6
* sci-biology/ncbi-tools++-12.0.0: first compile-able ebuild, wow, huge thanks ...Martin Mokrejš2014-06-254-6/+444
* more changes to get ncbi-tools++-12.0.0 compiledMartin Mokrejš2014-06-256-1448/+1968
* sci-biology/prot4EST: new package, missing LICENSE, missing dev-perl/ depsMartin Mokrejš2014-06-242-0/+16
* sci-biology/prot4EST: new package, missing LICENSE, missing dev-perl/ depsMartin Mokrejš2014-06-242-0/+38
* dropped the duplicate part from the patchMartin Mokrejš2014-06-231-1660/+0
* add an extra patch for configure until we find a way to ensure user has autoc...Martin Mokrejš2014-06-232-6/+46083
* updating the ChangeLog to note where the ncbi-tools++-12.0.0-support-autoconf...Martin Mokrejš2014-06-231-1/+8
* add patches for 12.0.0 to support autoconf-2.60 (so far 2.59 was needed)Martin Mokrejš2014-06-232-3/+1667
* sci-biology/sgp2: new package, worksMartin Mokrejš2014-06-175-0/+141
* sci-biology/geneid: new package, worksMartin Mokrejš2014-06-175-0/+62
* sci-biology/ncbi-tools++: added a note about a taxonomy database add-on not y...Martin Mokrejš2014-06-023-0/+12
* Add new ebuildAlexey Shvetsov2014-06-024-0/+54
* sci-biology/cd-hit-auxtools: added HTML manual pageMartin Mokrejš2014-06-013-1/+8
* sci-biology/cd-hit-auxtools: new package, needs gcc<=4.6.4 or some CXXFLAG to...Martin Mokrejš2014-06-015-0/+109
* sci-biology/cd-hit-4.6.1: forgot to re-enable the reworked patchMartin Mokrejš2014-06-012-1/+4
* sci-biology/cd-hit-4.6.1: version bumpMartin Mokrejš2014-06-015-0/+195
* sci-biology/bedtools-2.20.1: version bumpMartin Mokrejš2014-05-303-1/+7
* sci-biology/khmer: Version BUmpJustin Lecher2014-05-154-1/+71