aboutsummaryrefslogtreecommitdiff
Commit message (Expand)AuthorAgeFilesLines
* cluster to fsl_cluster renameHorea Christian2016-04-041-1/+1
* sci-biology/abyss: moved to main treeDavid Seifert2016-04-0313-367/+0
* sci-biology/abyss: fix automagic haskell deps, bug #534412Sergei Trofimovich2016-04-032-4/+22
* sci-biology/MolBioLib: yet another package with bundled samtools, bamtools etc.Martin Mokrejš2016-04-013-0/+44
* sci-biology/roche454ace2caf: Drop keywords, Bump to EAPI=6Marius Brehler2016-04-011-3/+3
* sci-biology/gap2caf: Drop keywordsMarius Brehler2016-04-011-2/+2
* sci-biology/staden: Drop keywords since keywords were droped for staden_docMarius Brehler2016-04-011-1/+1
* sci-biology/staden: Fix copyright and dependciesMarius Brehler2016-04-012-4/+4
* sci-biology/bamtools: version bump; still suffers gentoo bug #550144Martin Mokrejš2016-04-013-0/+55
* sci-biology/reapr: quick and dirty Debian patches do not help me with sci-bio...Martin Mokrejš2016-04-013-3/+277
* sci-biology/karect: new packageMartin Mokrejš2016-03-313-0/+46
* sci-biology/cross_genome: polish ebuild syntaxMartin Mokrejš2016-03-301-1/+1
* sci-biology/CONTIGuator: version bump; added KEYWORDS because DEPENDencies ar...Martin Mokrejš2016-03-303-17/+32
* sci-biology/arachne: new package; does not compile (upstream contacted) and t...Martin Mokrejš2016-03-303-0/+54
* sci-biology/cap3-bin: fix version number to match version generated at runtim...Martin Mokrejš2016-03-303-0/+43
* sci-biology/reapr: new package with bundled samtools, bamtools, tabix (nowada...Martin Mokrejš2016-03-303-0/+70
* sci-biology/exomiser-bin: improve ebuild, fix LICENSE, a 19GB files should be...Martin Mokrejš2016-03-303-24/+34
* sci-biology/DisEMBL: added DEPENDency on tiseanMartin Mokrejš2016-03-301-1/+1
* sci-biology/TransDecoder: version bumpMartin Mokrejš2016-03-303-0/+106
* fixing /# : $/# $/Martin Mokrejš2016-03-301-1/+1
* fixing /# : $/# $/Martin Mokrejš2016-03-301-1/+1
* fixing /# : $/# $/Martin Mokrejš2016-03-303-0/+38
* sci-biology/perga: added some LICENSE, fix CFLAGSMartin Mokrejš2016-03-302-0/+48
* sci-biology/artemis: install docs, cleanup ebuild and bring it in sync with s...Martin Mokrejš2016-03-302-6/+16
* sci-biology/artemis-bin: install docs, cleanup ebuild and bring it in sync wi...Martin Mokrejš2016-03-301-1/+1
* sci-biology/artemis-bin: install docs, cleanup ebuild and bring it in sync wi...Martin Mokrejš2016-03-302-6/+25
* sci-biology/act-bin: new java package with upstream binariesMartin Mokrejš2016-03-303-0/+66
* sci-biology/scaffold_builder: clarify descriptionMartin Mokrejš2016-03-301-1/+1
* sci-biology/staden_doc: removing KEYWORDS as upstream just fixed generation o...Martin Mokrejš2016-03-291-1/+1
* sci-biology/perlprimer: Follow pkgmove of perl-tkJustin Lecher2016-03-291-1/+1
* sci-biology/manatee-igs: Fix typo in depsJustin Lecher2016-03-291-3/+3
* sci-biology/ONTO-PERL: Fix typo in depsJustin Lecher2016-03-291-3/+3
* sci-biology/staden: add a note about some tutorial availableMartin Mokrejš2016-03-252-0/+8
* sci-biology/staden: io_lib/bam.h appeared first in io_lib-1.13.8Martin Mokrejš2016-03-252-2/+3
* sci-biology/staden: rename patch files; remove unnecessary patchMartin Mokrejš2016-03-254-17/+0
* sci-biology/fgap: fix typo in a package nameMartin Mokrejš2016-03-251-1/+1
* sci-biology/consed: fix ebuild not to create /etc/consedrc/ but to create a ...Martin Mokrejš2016-03-241-2/+1
* sci-biology/amos: document 'Could not open file LIBGUESTFS_PATH=/usr/share/g...Martin Mokrejš2016-03-232-2/+17
* sci-biology/staden: version bump; remove unused USE=curl, introduce USE=doc f...Martin Mokrejš2016-03-233-18/+11
* sci-biology/staden_doc: new packageMartin Mokrejš2016-03-233-0/+57
* sci-biology/fgap: new package which needs either octave or matlab runtimeMartin Mokrejš2016-03-233-0/+39
* sci-biology/consed-29: add also DEPEND on >=samtools-0.1.18Martin Mokrejš2016-03-201-0/+1
* sci-biology/consed: fix the autogenerated /etc/env.d/ file and make sure the ...Martin Mokrejš2016-03-181-4/+4
* sci-biology/scythe: improve DESCRIPTIONMartin Mokrejš2016-03-171-1/+1
* sci-biology/cutadapt: version bump and remove old ones; update HOMEPAGEMartin Mokrejš2016-03-155-41/+3
* sci-biology/cd-hit: add a local copy of the wiki manualMartin Mokrejš2016-03-153-4/+215
* sci-biology/cd-hit: update digest of the fetched HTML manualMartin Mokrejš2016-03-151-1/+1
* sci-biology/cd-hit: version bump; new SRC_URI; merge with sci-biology/cd-hit-...Martin Mokrejš2016-03-154-70/+133
* sci-biology/trimmomatic: version bump; no 0.35 PDF manual exists for downloadMartin Mokrejš2016-03-152-3/+3
* sci-biology/scbi_mapreduce: version bump; do not die on missing README.rdoc a...Martin Mokrejš2016-03-142-2/+2