summaryrefslogtreecommitdiff
diff options
context:
space:
mode:
authorJakov Smolic <jakov.smolic@sartura.hr>2020-12-28 16:49:53 +0100
committerDavid Seifert <soap@gentoo.org>2020-12-28 16:49:53 +0100
commit67871f63cf6eef11ea46f2bea168c6d4f08c1520 (patch)
treef4a7835e4a0d903939b439cafdf733554fb2fe0a /dev-python/pyamg
parentdev-libs/json-glib: fix meson option name (diff)
downloadgentoo-67871f63cf6eef11ea46f2bea168c6d4f08c1520.tar.gz
gentoo-67871f63cf6eef11ea46f2bea168c6d4f08c1520.tar.bz2
gentoo-67871f63cf6eef11ea46f2bea168c6d4f08c1520.zip
dev-python/pyamg: Bump to 4.0.0
Closes: https://bugs.gentoo.org/738128 Signed-off-by: Jakov Smolic <jakov.smolic@sartura.hr> Signed-off-by: David Seifert <soap@gentoo.org>
Diffstat (limited to 'dev-python/pyamg')
-rw-r--r--dev-python/pyamg/Manifest1
-rw-r--r--dev-python/pyamg/files/pyamg-4.0.0-test.patch14
-rw-r--r--dev-python/pyamg/pyamg-4.0.0.ebuild25
3 files changed, 40 insertions, 0 deletions
diff --git a/dev-python/pyamg/Manifest b/dev-python/pyamg/Manifest
index d3ed6ae9df15..27a0eed3b906 100644
--- a/dev-python/pyamg/Manifest
+++ b/dev-python/pyamg/Manifest
@@ -1 +1,2 @@
DIST pyamg-3.2.1.tar.gz 765723 BLAKE2B 72c59c0fe93363f73d8ba4c6297920dd1ca8406b048cf0357baec5f2390bdb524421a35ef65e790be45b543e9e162067ee8f8f09327b464a4bc5c9cec368b003 SHA512 6be0dd068417389934ce97813321367920abf6f9f5e94ce2df8bd796edc797cedd492c9153b62466f7d68055a05821447dcf21578ccdfe3294766a49a9ac220e
+DIST pyamg-4.0.0.tar.gz 717171 BLAKE2B 16483d829e8a938359827ca8ebe3093c890685244125576e05220910b66e9aeec278472134d10c589e58dfbd363930cdd7ae13d16c9b9d54c1bd5250e66f4677 SHA512 cdd27834c12ef18f023e78b5b946c06bc2c35f73cf65fc4c76da2fab75f23466e6c1a4b3dccb8506be3ada7e0bafda38122d3d7315deebc7959d2e5300d9add1
diff --git a/dev-python/pyamg/files/pyamg-4.0.0-test.patch b/dev-python/pyamg/files/pyamg-4.0.0-test.patch
new file mode 100644
index 000000000000..316d0a2baad4
--- /dev/null
+++ b/dev-python/pyamg/files/pyamg-4.0.0-test.patch
@@ -0,0 +1,14 @@
+Backported from: https://github.com/pyamg/pyamg/commit/6f5e549e6105e18cfff9bf4b5f1834d081fa4510
+Author: Luke Olson
+--- a/pyamg/aggregation/tests/test_smooth.py
++++ b/pyamg/aggregation/tests/test_smooth.py
+@@ -485,6 +485,9 @@ class TestEnergyMin(TestCase):
+ Bc = ml.levels[1].B
+ P = ml.levels[0].P.tocsr()
+
++ T.eliminate_zeros()
++ P.eliminate_zeros()
++
+ # P should preserve B in its range, wherever P
+ # has enough nonzeros
+ mask = ((P.indptr[1:] - P.indptr[:-1]) >= B.shape[1])
diff --git a/dev-python/pyamg/pyamg-4.0.0.ebuild b/dev-python/pyamg/pyamg-4.0.0.ebuild
new file mode 100644
index 000000000000..798cc36c9ec3
--- /dev/null
+++ b/dev-python/pyamg/pyamg-4.0.0.ebuild
@@ -0,0 +1,25 @@
+# Copyright 1999-2020 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+DISTUTILS_USE_SETUPTOOLS=bdepend
+PYTHON_COMPAT=( python3_{6..9} )
+inherit distutils-r1
+
+DESCRIPTION="Algebraic multigrid solvers in Python"
+HOMEPAGE="https://pyamg.org"
+SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
+
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+
+RDEPEND="
+ dev-python/numpy[${PYTHON_USEDEP}]
+ dev-python/pybind11[${PYTHON_USEDEP}]
+ dev-python/scipy[${PYTHON_USEDEP}]"
+
+distutils_enable_tests setup.py
+
+PATCHES=( "${FILESDIR}"/${P}-test.patch )