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authorJustin Lecher <jlec@gentoo.org>2016-02-01 12:13:00 +0100
committerJustin Lecher <jlec@gentoo.org>2016-02-01 12:13:20 +0100
commitc67f961c0f4e2644fd73be98fa77e4fb2dd9b0d1 (patch)
tree47c9e35aa63527dd13363412b1e1c00bb8bc97f8 /sci-biology
parentdev-vcs/rapidsvn: Inherit multilib.eclass where necessary (diff)
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sci-biology/rebase: Version Bump
Package-Manager: portage-2.2.27 Signed-off-by: Justin Lecher <jlec@gentoo.org>
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/rebase/Manifest1
-rw-r--r--sci-biology/rebase/rebase-1602.ebuild46
2 files changed, 47 insertions, 0 deletions
diff --git a/sci-biology/rebase/Manifest b/sci-biology/rebase/Manifest
index 5654025e541a..42575eae5e6f 100644
--- a/sci-biology/rebase/Manifest
+++ b/sci-biology/rebase/Manifest
@@ -1,3 +1,4 @@
DIST rebase-1510.tar.xz 90412200 SHA256 0a33a34003c95f65d8ec8bbf11907bccad47d0bdddc39030a663df5ef2922f87 SHA512 c76b42df5a5bc64a951693b35a8664195a0fb1b84bdd64f80e8986a705ca1279e51c324153a83272ecb9b3dfb3fd565cb43c2b25c9e37655767c278e6320590e WHIRLPOOL 238841844c19ad028147a4a5a366a219e405b1ae1d0ae79767775518a0ecdabe37948a260724e4053af183ad00799c60da21d57dae84cdc6859e19a04aac314a
DIST rebase-1511.tar.xz 95276416 SHA256 e8b0686ad02d15d833febf5f353cb66febfccb730fb7e92968b05739d8d4a494 SHA512 b7998763a092389be8d5eb4b9c59a7297859d4f03be6a4c3933288d5407fe1b64268d6fb03b7df0604ad0801991937ee345c2f932c9621ea7bab4d68c9c59261 WHIRLPOOL 53ce94b77fb5b1557b790bad48064066833f6800ebef29a33f80e3fa6b8dbf0666443dc0301521e88d4e9f38579011edc37979f12b95cd84ea8afb07f7e8ffc7
DIST rebase-1601.tar.xz 99890720 SHA256 de0f7dd6cf831c52434e7434491b9c738c41aab51c8f8d91b243569f25209eb8 SHA512 a6e3faf7fc2eaf475605ed72db7f1cfdc4ba8c280f1650f723c5a664090ed64e7ac014012042c466d65edea8b2767bbcb0f38c3d5b69dbdb35e89cf0685c92ad WHIRLPOOL f06338c0d6ef59d7ac792f6f7fc48338b73d659614c0694109152fd33606174be6741cb662478f38e37e9622118de27c3c30c537b741b49e218f64973fe2c783
+DIST rebase-1602.tar.xz 101007300 SHA256 26257dc10a6aba54024772956ae03e8530d4b2176db60dcc386427196a936d0b SHA512 7a00a11019124a835ef3d328c33cc4ab9d59665b3c929cf02a44bc09de8ca53185b939057705ee6ce79eeddc9ca9b8246582895b949dd38abe9066a380e3a2c9 WHIRLPOOL fac62146ab6ff09895cc9e4ece2b4869910c90c342051c5446085267585362adcc8a30af66a58d068d86c3eb6e7a37ceb32224a69114aa629a62a958fae09ed0
diff --git a/sci-biology/rebase/rebase-1602.ebuild b/sci-biology/rebase/rebase-1602.ebuild
new file mode 100644
index 000000000000..9adb365ae5f1
--- /dev/null
+++ b/sci-biology/rebase/rebase-1602.ebuild
@@ -0,0 +1,46 @@
+# Copyright 1999-2016 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=5
+
+MY_PV=${PV#1}
+
+DESCRIPTION="A restriction enzyme database"
+HOMEPAGE="http://rebase.neb.com"
+SRC_URI="https://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz"
+
+SLOT="0"
+LICENSE="public-domain"
+KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris"
+IUSE="emboss minimal"
+
+RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )"
+DEPEND="${RDEPEND}"
+
+RESTRICT="binchecks strip"
+
+src_compile() {
+ if use emboss; then
+ echo; einfo "Indexing Rebase for usage with EMBOSS."
+ mkdir REBASE || die
+ EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \
+ -protofile proto.${MY_PV} -equivalences \
+ || die "Indexing Rebase failed."
+ echo
+ fi
+}
+
+src_install() {
+ if ! use minimal; then
+ insinto /usr/share/${PN}
+ doins withrefm.${MY_PV} proto.${MY_PV}
+ fi
+ newdoc REBASE.DOC README
+ if use emboss; then
+ insinto /usr/share/EMBOSS/data/REBASE
+ doins REBASE/embossre.{enz,ref,sup}
+ insinto /usr/share/EMBOSS/data
+ doins REBASE/embossre.equ
+ fi
+}