Commit message (Collapse) | Author | Age | Files | Lines | |
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* | root and root-docs: version bump | Andrew Savchenko | 2014-07-06 | 8 | -1/+486 |
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* | sci-biology/MaSuRCA: add dependency on sci-biology/quorum | Martin Mokrejš | 2014-07-04 | 1 | -1/+2 |
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* | sci-biology/clview: add dependency on =x11-libs/fox-1.6* | Martin Mokrejš | 2014-07-04 | 3 | -3/+9 |
| | | | | Package-Manager: portage-2.2.7 | ||||
* | sci-biology/caftools: clarified package description | Martin Mokrejš | 2014-07-04 | 2 | -3/+6 |
| | | | | Package-Manager: portage-2.2.7 | ||||
* | sci-biology/emboss-6.3.1_p4-r2: added a patch for 'undefined reference to ↵ | Martin Mokrejš | 2014-07-04 | 3 | -0/+20 |
| | | | | | | c_plwid' bug #493724 Package-Manager: portage-2.2.7 | ||||
* | sci-biology/Atlas-Link: noted dependence, see bug #516366 | Martin Mokrejš | 2014-07-04 | 4 | -0/+46 |
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* | sci-biology/gap2caf: remove -rpath-link from src/Makefile | Martin Mokrejš | 2014-07-04 | 2 | -2/+6 |
| | | | | Package-Manager: portage-2.2.7 | ||||
* | Nnot available anymore | Justin Lecher | 2014-07-04 | 4 | -64/+0 |
| | | | | Signed-off-by: Justin Lecher <jlec@gentoo.org> | ||||
* | sci-chemistry/hydronmr: Fix emul-linux deps for modern multilib | Justin Lecher | 2014-07-04 | 2 | -3/+3 |
| | | | | Package-Manager: portage-2.2.10 | ||||
* | sci-chemistry/nmrpipe: Fix emul-linux deps for modern multilib | Justin Lecher | 2014-07-04 | 2 | -6/+14 |
| | | | | | Package-Manager: portage-2.2.10 RepoMan-Options: --force | ||||
* | sci-chemistry/unio: Fix emul-linux deps for modern multilib | Justin Lecher | 2014-07-04 | 2 | -3/+6 |
| | | | | | Package-Manager: portage-2.2.10 RepoMan-Options: --force | ||||
* | sci-libs/fftw: Drop reference to app-emulation/emul-linux-x86-soundlibs | Justin Lecher | 2014-07-04 | 2 | -4/+4 |
| | | | | Package-Manager: portage-2.2.10 | ||||
* | More prefix fixes, add missing dep | Sébastien Fabbro | 2014-07-03 | 2 | -9/+11 |
| | | | | Package-Manager: portage-2.2.10.1-prefix | ||||
* | Merge branch 'master' of git://git.overlays.gentoo.org/proj/sci | Sébastien Fabbro | 2014-07-03 | 24 | -130/+339 |
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| * | sci-physcis/root-9999: patch moved to upstream | Andrew Savchenko | 2014-07-03 | 2 | -2/+4 |
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| * | sci-chemistry/cpmgfit: New package written by me | Justin Lecher | 2014-07-03 | 4 | -0/+65 |
| | | | | | | | | | | Package-Manager: portage-2.2.10 RepoMan-Options: --force | ||||
| * | Merge branch 'master' of git+ssh://git.overlays.gentoo.org/proj/sci | Martin Mokrejš | 2014-07-03 | 2 | -0/+4 |
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| | * | use ninja | Christoph Junghans | 2014-07-02 | 2 | -0/+4 |
| | | | | | | | | | | | | Package-Manager: portage-2.2.8-r1 | ||||
| * | | sci-biology/jellyfish: new package, works | Martin Mokrejš | 2014-07-03 | 4 | -0/+38 |
| |/ | | | | | | | Package-Manager: portage-2.2.7 | ||||
| * | Merge branch 'master' of git+ssh://git.overlays.gentoo.org/proj/sci | Martin Mokrejš | 2014-07-03 | 19 | -34/+607 |
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| | * | sci-physics/root: fix aux docs installation | Andrew Savchenko | 2014-07-03 | 4 | -3/+26 |
| | | | | | | | | | | | | | | | Do not compress files required for .credits, .demo, .license commands. Fix tutorials patch. | ||||
| | * | Merge remote-tracking branch 'github/master' | François Bissey | 2014-07-03 | 1 | -0/+1 |
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| | * | | More fix for macos. We need to create the link for both linux and macos. | François Bissey | 2014-07-03 | 2 | -1/+5 |
| | | | | | | | | | | | | | | | | Package-Manager: portage-2.2.10 | ||||
| * | | | sci-biology/tablet-bin: version bump; updated the license | Martin Mokrejš | 2014-07-03 | 3 | -0/+104 |
| | | | | | | | | | | | | | | | | Package-Manager: portage-2.2.7 | ||||
| * | | | sci-biology/tablet: cleaned up the ebuilds, they compile and install but the ↵ | Martin Mokrejš | 2014-07-03 | 5 | -127/+96 |
| | | | | | | | | | | | | | | | | | | | | | | | | bundled samtools-*.jar is not found; updated the license Package-Manager: portage-2.2.7 | ||||
* | | | | Merge branch 'master' of git://git.overlays.gentoo.org/proj/sci; ↵ | Sébastien Fabbro | 2014-07-02 | 1 | -0/+1 |
|\ \ \ \ | |_|/ / |/| | / | | |/ | |/| | github.com:gentoo-science/sci | ||||
| * | | Merge pull request #235 from gentryx/master | Sébastien Fabbro | 2014-07-02 | 1 | -0/+1 |
| |\ \ | | | | | | | | | added lib path for VisIt's libsim and friends | ||||
| | * | | added lib path for VisIt's libsim and friends | Andreas Schäfer | 2014-07-02 | 1 | -0/+1 |
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* | | | | sci-physics/root: fix ROOT's CLI commands | Andrew Savchenko | 2014-07-02 | 3 | -1/+40 |
| | | | | | | | | | | | | | | | | | | | | Arrange changes required for .credits, .demos and .license to work properly. | ||||
* | | | | app-doc/root-docs: properly generate gif images | Andrew Savchenko | 2014-07-02 | 5 | -22/+15 |
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* | | | | sci-physics/root: fix Cling library load | Andrew Savchenko | 2014-07-02 | 4 | -9/+461 |
|/ / / | | | | | | | | | | | | | It was broken for prefix builds (that's how ROOT is installed in Gentoo. See bug https://sft.its.cern.ch/jira/browse/ROOT-6410. | ||||
* | | | Merge remote-tracking branch 'gentoo/master' into upstream-master | Jauhien Piatlicki | 2014-07-02 | 2 | -2/+6 |
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| * | | Tested on x64-macos, keywording. | François Bissey | 2014-07-02 | 2 | -2/+6 |
| |/ | | | | | | | Package-Manager: portage-2.2.10 | ||||
* | | Merge pull request #234 from aufau/pynomo | Justin | 2014-07-01 | 4 | -0/+57 |
|\ \ | |/ |/| | dev-python/pynomo: New package for bug #515682 | ||||
| * | dev-python/pynomo: New package for bug #515682 | Witold Pilat | 2014-07-01 | 4 | -0/+57 |
|/ | | | | Package-Manager: portage-2.2.10 | ||||
* | Merge branch 'jonasstein-master' | Justin Lecher | 2014-07-01 | 3 | -0/+52 |
|\ | | | | | | | | | * jonasstein-master: add Clip4, the Cologne Laue Indexiation Program | ||||
| * | add Clip4, the Cologne Laue Indexiation Program | Jonas Stein | 2014-06-30 | 3 | -0/+52 |
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* | | Tweak src_install for OS X support. Added documentation in the ebuild itself. | François Bissey | 2014-07-01 | 2 | -1/+7 |
|/ | | | | Package-Manager: portage-2.2.10 | ||||
* | sci-chemistry/coot: Fix sandbox violation | Justin Lecher | 2014-06-30 | 3 | -1/+28 |
| | | | | Package-Manager: portage-2.2.10 | ||||
* | app-doc/root-docs: fix unpack stage for non-live versions | Andrew Savchenko | 2014-06-30 | 1 | -0/+2 |
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* | sci-mathematics/scilab: support jdk1.8 | Guillaume Horel | 2014-06-29 | 3 | -1/+82 |
| | | | | Package-Manager: portage-2.2.10 | ||||
* | sci-physics/root, app-doc/root-docs: version bump to ROOT-6 | Andrew Savchenko | 2014-06-29 | 28 | -923/+1020 |
| | | | | | This is a major version bump for ROOT-6. Please refer to package's ChangeLog files for details. Testing is welcome. | ||||
* | Merge remote-tracking branch 'gentoo/master' into upstream-master | Jauhien Piatlicki | 2014-06-28 | 29 | -83/+6516 |
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| * | Added forgotten patch files for sci-libs/bigdft-abi. ↵ | Honza Macháček | 2014-06-27 | 6 | -0/+5810 |
| | | | | | | | | bigdft-abi-1.0.4-0005.patch too big for repoman's taste. | ||||
| * | Version bumped to 7.6.4. ScaLAPACK support, and use of the MPI ↵ | Honza Macháček | 2014-06-27 | 4 | -5/+416 |
| | | | | | | | | | | | | implementation of sci-libs/fftw added. Minor attempts on enhancements and cleanup. Package-Manager: portage-2.2.10 | ||||
| * | The Abinit patches incorporated in sci-libs/bigdft-abi-1.0.4-r3.ebuild. When ↵ | Honza Macháček | 2014-06-27 | 4 | -34/+62 |
| | | | | | | | | | | | | compiling against sci-libs/scalapack, made to use ScaLAPACK as BLACS as well, not to break sci-physics/abinit by defining fake BLACS routines. Testing removed to appease repoman and avoid copying of all the old test suite over the current broken version. Package-Manager: portage-2.2.10 | ||||
| * | sci-libs/libxc-2.0.3.ebuild adjusted to export the C preprocessor name in ↵ | Honza Macháček | 2014-06-27 | 2 | -1/+9 |
| | | | | | | | | | | | | the FCCPP variable that the build system looks for Package-Manager: portage-2.2.10 | ||||
| * | Update chimera to new version | Alexey Shvetsov | 2014-06-27 | 3 | -1/+101 |
| | | | | | | | | Package-Manager: portage-2.2.10 | ||||
| * | sci-biology/prot4EST: remove version numbers from the installed binary filename | Martin Mokrejš | 2014-06-27 | 1 | -0/+1 |
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| * | sci-biology/BamView: fixed java deps | Martin Mokrejš | 2014-06-27 | 1 | -2/+3 |
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