Commit message (Collapse) | Author | Age | Files | Lines | |
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* | sci-biology/epga: new package; no LICENSE file | Martin Mokrejš | 2015-01-15 | 3 | -0/+55 |
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* | sci-biology/edena: new package | Martin Mokrejš | 2015-01-15 | 4 | -0/+54 |
| | | | | Package-Manager: portage-2.2.7 | ||||
* | added a note about additional bundled package licenses | Martin Mokrejš | 2015-01-15 | 2 | -1/+4 |
| | | | | Package-Manager: portage-2.2.7 | ||||
* | version bump | Martin Mokrejš | 2015-01-15 | 3 | -3/+9 |
| | | | | Package-Manager: portage-2.2.7 | ||||
* | sci-biology/sabre: new package | Martin Mokrejš | 2015-01-15 | 3 | -0/+57 |
| | | | | Package-Manager: portage-2.2.7 | ||||
* | correct package description | Martin Mokrejš | 2015-01-15 | 2 | -4/+6 |
| | | | | Package-Manager: portage-2.2.7 | ||||
* | version bump, masking a crappy package until at least the Makefile's ↵ | Martin Mokrejš | 2015-01-15 | 3 | -5/+18 |
| | | | | | | propagate an error code back to upstream caller, https://code.google.com/p/mosaik-aligner/issues/detail?id=135 Package-Manager: portage-2.2.7 | ||||
* | sci-biology/ncbi-blast+: new package, ebuild derived from ↵ | Martin Mokrejš | 2015-01-15 | 6 | -0/+1043 |
| | | | | ncbi-tools++-12.0.0.ebuild with a Debian patch | ||||
* | drop old version which already landed in main tree; add ebuild for new version | Martin Mokrejš | 2015-01-15 | 3 | -4/+10 |
| | | | | Package-Manager: portage-2.2.7 | ||||
* | sci-biology/bcftools: new package: compiles against bundled ↵ | Martin Mokrejš | 2015-01-15 | 4 | -0/+46 |
| | | | | | | sci-libs/htslib-1.1 but does not install it Package-Manager: portage-2.2.7 | ||||
* | Merge branch 'master' of ssh://github.com/gentoo-science/sci | Christoph Junghans | 2015-01-12 | 1 | -2/+2 |
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| * | sci-biology/quicktree: Really move to EAPI=5 | Marius Brehler | 2015-01-11 | 1 | -2/+2 |
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* | | sci-biology/gfftools: new package | Martin Mokrejš | 2015-01-12 | 4 | -0/+46 |
|/ | | | | Package-Manager: portage-2.2.7 | ||||
* | Merge pull request #319 from marbre/rnaplex | Justin | 2015-01-10 | 3 | -12/+10 |
|\ | | | | | ci-biology/rnaplex: Move to EAPI=5; Update homepage and SRC_URI. | ||||
| * | sci-biology/rnaplex: Fixes according to jlec's advices | Marius Brehler | 2015-01-10 | 2 | -8/+2 |
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| * | Drop unnecessary die | Marius Brehler | 2015-01-10 | 1 | -1/+1 |
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| * | ci-biology/rnaplex: Move to EAPI=5; Update homepage and SRC_URI. | Marius Brehler | 2015-01-10 | 3 | -7/+11 |
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* | | Merge pull request #317 from marbre/codonw | Christoph Junghans | 2015-01-10 | 2 | -7/+11 |
|\ \ | | | | | | | sci-biology/codonw: Move to EAPI=5 | ||||
| * | | sci-biology/codonw: Drop unnecessary dies | Marius Brehler | 2015-01-10 | 1 | -4/+4 |
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| * | | sci-biology/codonw: Move to EAPI=5 | Marius Brehler | 2015-01-10 | 2 | -3/+7 |
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* | | sci-biology/merlin: Drop unnecessary dies | Marius Brehler | 2015-01-10 | 1 | -3/+3 |
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* | | sci-biology/merlin: Move to EAPI=5 | Marius Brehler | 2015-01-10 | 2 | -3/+7 |
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* | Merge pull request #313 from marbre/InterMine | Justin | 2015-01-10 | 2 | -4/+8 |
|\ | | | | | Fix InterMine QA issues | ||||
| * | Fix InterMine ebuil: Replace InterMine license by LGPL-2.1+ | Marius Brehler | 2015-01-10 | 2 | -1/+5 |
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| * | Fix InterMine QA issues | Marius Brehler | 2015-01-10 | 1 | -4/+4 |
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* | | sci-biology/trans-abyss: Soma polishing | Justin Lecher | 2015-01-10 | 2 | -1/+4 |
| | | | | | | | | Package-Manager: portage-2.2.15 | ||||
* | | Merge remote-tracking branch 'github/master' | Justin Lecher | 2015-01-10 | 1 | -2/+3 |
|\ \ | | | | | | | | | | | | | * github/master: sci-biology/trans-abys: Fix license and keywords | ||||
| * | | sci-biology/trans-abys: Fix license and keywords | Marius Brehler | 2015-01-10 | 1 | -2/+3 |
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* | | | sci-biology/primerD: Fix license | Justin Lecher | 2015-01-10 | 2 | -4/+4 |
| | | | | | | | | | | | | Package-Manager: portage-2.2.15 | ||||
* | | | sci-biology/pb-jelly: Fix license; add missing [] | Justin Lecher | 2015-01-10 | 2 | -3/+7 |
| | | | | | | | | | | | | Package-Manager: portage-2.2.15 | ||||
* | | | sci-biology/pb-honey: Fix license; add missing [] | Justin Lecher | 2015-01-10 | 2 | -6/+14 |
| | | | | | | | | | | | | Package-Manager: portage-2.2.15 | ||||
* | | | sci-biology/jigsaw: Fix license | Justin Lecher | 2015-01-10 | 2 | -5/+5 |
| | | | | | | | | | | | | Package-Manager: portage-2.2.15 | ||||
* | | | sci-biology/ePCR: Fix license | Justin Lecher | 2015-01-10 | 2 | -7/+14 |
| | | | | | | | | | | | | Package-Manager: portage-2.2.15 | ||||
* | | | sci-biology/pvmsx: Soma QA and polishing | Justin Lecher | 2015-01-10 | 3 | -24/+29 |
| | | | | | | | | | | | | Package-Manager: portage-2.2.15 | ||||
* | | | sci-biology/ESTate: Soma QA and polishing | Justin Lecher | 2015-01-10 | 2 | -9/+22 |
| | | | | | | | | | | | | Package-Manager: portage-2.2.15 | ||||
* | | | sci-biology/SEECER: Fix license | Justin Lecher | 2015-01-10 | 2 | -4/+8 |
|/ / | | | | | | | Package-Manager: portage-2.2.15 | ||||
* | | sci-biology/cegma: Fix license;drop keywords due to missing keyowrds of deps | Justin Lecher | 2015-01-10 | 2 | -4/+8 |
| | | | | | | | | Package-Manager: portage-2.2.15 | ||||
* | | sci-biology/MochiView: Fix license | Justin Lecher | 2015-01-10 | 2 | -1/+4 |
| | | | | | | | | Package-Manager: portage-2.2.15 | ||||
* | | sci-biology/ICC: Fix license | Justin Lecher | 2015-01-10 | 2 | -4/+7 |
| | | | | | | | | Package-Manager: portage-2.2.15 | ||||
* | | sci-biology/CAutils: Fix license | Justin Lecher | 2015-01-10 | 2 | -4/+11 |
| | | | | | | | | Package-Manager: portage-2.2.15 | ||||
* | | sci-biology/Atlas_GapFill: Fix license | Justin Lecher | 2015-01-10 | 2 | -5/+13 |
| | | | | | | | | Package-Manager: portage-2.2.15 | ||||
* | | sci-biology/Atlas: Fix license | Justin Lecher | 2015-01-10 | 2 | -1/+4 |
| | | | | | | | | Package-Manager: portage-2.2.15 | ||||
* | | sci-biology/est2assembly: Bump EAPI; drop KEYWORDS from live ebuild; fix deps | Justin Lecher | 2015-01-10 | 3 | -24/+33 |
| | | | | | | | | Package-Manager: portage-2.2.15 | ||||
* | | sci-biology/blue: Fix license | Justin Lecher | 2015-01-10 | 2 | -2/+6 |
| | | | | | | | | Package-Manager: portage-2.2.15 | ||||
* | | sci-biology/BRANCH: Move from git-2 to git-r3 eclass; add HOMEPAGE; be ↵ | Justin Lecher | 2015-01-10 | 2 | -7/+12 |
| | | | | | | | | | | | | verbose during compilation; install docs Package-Manager: portage-2.2.15 | ||||
* | | sci-biology/velvetk: Simplify ebuild | Justin Lecher | 2015-01-10 | 2 | -5/+4 |
| | | | | | | | | Package-Manager: portage-2.2.15 | ||||
* | | sci-biology/zmsort: Bump EAPI | Justin Lecher | 2015-01-10 | 3 | -8/+12 |
| | | | | | | | | Package-Manager: portage-2.2.15 | ||||
* | | sci-biology/tigr-closure: Some QA, add license | Justin Lecher | 2015-01-10 | 2 | -25/+25 |
| | | | | | | | | Package-Manager: portage-2.2.15 | ||||
* | | new package; install *.pm into PERL5LIB/cegma and pass that via env.d | Martin Mokrejš | 2015-01-10 | 4 | -0/+54 |
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* | | install *.pm into PERL5LIB/TransDecoder and pass that via env.d | Martin Mokrejš | 2015-01-10 | 2 | -2/+8 |
| | | | | | | | | Package-Manager: portage-2.2.7 |