aboutsummaryrefslogtreecommitdiff
Commit message (Collapse)AuthorAgeFilesLines
* sci-biology/epga: new package; no LICENSE fileMartin Mokrejš2015-01-153-0/+55
|
* sci-biology/edena: new packageMartin Mokrejš2015-01-154-0/+54
| | | | Package-Manager: portage-2.2.7
* added a note about additional bundled package licensesMartin Mokrejš2015-01-152-1/+4
| | | | Package-Manager: portage-2.2.7
* version bumpMartin Mokrejš2015-01-153-3/+9
| | | | Package-Manager: portage-2.2.7
* sci-biology/sabre: new packageMartin Mokrejš2015-01-153-0/+57
| | | | Package-Manager: portage-2.2.7
* correct package descriptionMartin Mokrejš2015-01-152-4/+6
| | | | Package-Manager: portage-2.2.7
* version bump, masking a crappy package until at least the Makefile's ↵Martin Mokrejš2015-01-153-5/+18
| | | | | | propagate an error code back to upstream caller, https://code.google.com/p/mosaik-aligner/issues/detail?id=135 Package-Manager: portage-2.2.7
* sci-biology/ncbi-blast+: new package, ebuild derived from ↵Martin Mokrejš2015-01-156-0/+1043
| | | | ncbi-tools++-12.0.0.ebuild with a Debian patch
* drop old version which already landed in main tree; add ebuild for new versionMartin Mokrejš2015-01-153-4/+10
| | | | Package-Manager: portage-2.2.7
* sci-biology/bcftools: new package: compiles against bundled ↵Martin Mokrejš2015-01-154-0/+46
| | | | | | sci-libs/htslib-1.1 but does not install it Package-Manager: portage-2.2.7
* Merge branch 'master' of ssh://github.com/gentoo-science/sciChristoph Junghans2015-01-121-2/+2
|\
| * sci-biology/quicktree: Really move to EAPI=5Marius Brehler2015-01-111-2/+2
| |
* | sci-biology/gfftools: new packageMartin Mokrejš2015-01-124-0/+46
|/ | | | Package-Manager: portage-2.2.7
* Merge pull request #319 from marbre/rnaplexJustin2015-01-103-12/+10
|\ | | | | ci-biology/rnaplex: Move to EAPI=5; Update homepage and SRC_URI.
| * sci-biology/rnaplex: Fixes according to jlec's advicesMarius Brehler2015-01-102-8/+2
| |
| * Drop unnecessary dieMarius Brehler2015-01-101-1/+1
| |
| * ci-biology/rnaplex: Move to EAPI=5; Update homepage and SRC_URI.Marius Brehler2015-01-103-7/+11
| |
* | Merge pull request #317 from marbre/codonwChristoph Junghans2015-01-102-7/+11
|\ \ | | | | | | sci-biology/codonw: Move to EAPI=5
| * | sci-biology/codonw: Drop unnecessary diesMarius Brehler2015-01-101-4/+4
| | |
| * | sci-biology/codonw: Move to EAPI=5Marius Brehler2015-01-102-3/+7
| |/
* | sci-biology/merlin: Drop unnecessary diesMarius Brehler2015-01-101-3/+3
| |
* | sci-biology/merlin: Move to EAPI=5Marius Brehler2015-01-102-3/+7
|/
* Merge pull request #313 from marbre/InterMineJustin2015-01-102-4/+8
|\ | | | | Fix InterMine QA issues
| * Fix InterMine ebuil: Replace InterMine license by LGPL-2.1+Marius Brehler2015-01-102-1/+5
| |
| * Fix InterMine QA issuesMarius Brehler2015-01-101-4/+4
| |
* | sci-biology/trans-abyss: Soma polishingJustin Lecher2015-01-102-1/+4
| | | | | | | | Package-Manager: portage-2.2.15
* | Merge remote-tracking branch 'github/master'Justin Lecher2015-01-101-2/+3
|\ \ | | | | | | | | | | | | * github/master: sci-biology/trans-abys: Fix license and keywords
| * | sci-biology/trans-abys: Fix license and keywordsMarius Brehler2015-01-101-2/+3
| | |
* | | sci-biology/primerD: Fix licenseJustin Lecher2015-01-102-4/+4
| | | | | | | | | | | | Package-Manager: portage-2.2.15
* | | sci-biology/pb-jelly: Fix license; add missing []Justin Lecher2015-01-102-3/+7
| | | | | | | | | | | | Package-Manager: portage-2.2.15
* | | sci-biology/pb-honey: Fix license; add missing []Justin Lecher2015-01-102-6/+14
| | | | | | | | | | | | Package-Manager: portage-2.2.15
* | | sci-biology/jigsaw: Fix licenseJustin Lecher2015-01-102-5/+5
| | | | | | | | | | | | Package-Manager: portage-2.2.15
* | | sci-biology/ePCR: Fix licenseJustin Lecher2015-01-102-7/+14
| | | | | | | | | | | | Package-Manager: portage-2.2.15
* | | sci-biology/pvmsx: Soma QA and polishingJustin Lecher2015-01-103-24/+29
| | | | | | | | | | | | Package-Manager: portage-2.2.15
* | | sci-biology/ESTate: Soma QA and polishingJustin Lecher2015-01-102-9/+22
| | | | | | | | | | | | Package-Manager: portage-2.2.15
* | | sci-biology/SEECER: Fix licenseJustin Lecher2015-01-102-4/+8
|/ / | | | | | | Package-Manager: portage-2.2.15
* | sci-biology/cegma: Fix license;drop keywords due to missing keyowrds of depsJustin Lecher2015-01-102-4/+8
| | | | | | | | Package-Manager: portage-2.2.15
* | sci-biology/MochiView: Fix licenseJustin Lecher2015-01-102-1/+4
| | | | | | | | Package-Manager: portage-2.2.15
* | sci-biology/ICC: Fix licenseJustin Lecher2015-01-102-4/+7
| | | | | | | | Package-Manager: portage-2.2.15
* | sci-biology/CAutils: Fix licenseJustin Lecher2015-01-102-4/+11
| | | | | | | | Package-Manager: portage-2.2.15
* | sci-biology/Atlas_GapFill: Fix licenseJustin Lecher2015-01-102-5/+13
| | | | | | | | Package-Manager: portage-2.2.15
* | sci-biology/Atlas: Fix licenseJustin Lecher2015-01-102-1/+4
| | | | | | | | Package-Manager: portage-2.2.15
* | sci-biology/est2assembly: Bump EAPI; drop KEYWORDS from live ebuild; fix depsJustin Lecher2015-01-103-24/+33
| | | | | | | | Package-Manager: portage-2.2.15
* | sci-biology/blue: Fix licenseJustin Lecher2015-01-102-2/+6
| | | | | | | | Package-Manager: portage-2.2.15
* | sci-biology/BRANCH: Move from git-2 to git-r3 eclass; add HOMEPAGE; be ↵Justin Lecher2015-01-102-7/+12
| | | | | | | | | | | | verbose during compilation; install docs Package-Manager: portage-2.2.15
* | sci-biology/velvetk: Simplify ebuildJustin Lecher2015-01-102-5/+4
| | | | | | | | Package-Manager: portage-2.2.15
* | sci-biology/zmsort: Bump EAPIJustin Lecher2015-01-103-8/+12
| | | | | | | | Package-Manager: portage-2.2.15
* | sci-biology/tigr-closure: Some QA, add licenseJustin Lecher2015-01-102-25/+25
| | | | | | | | Package-Manager: portage-2.2.15
* | new package; install *.pm into PERL5LIB/cegma and pass that via env.dMartin Mokrejš2015-01-104-0/+54
| |
* | install *.pm into PERL5LIB/TransDecoder and pass that via env.dMartin Mokrejš2015-01-102-2/+8
| | | | | | | | Package-Manager: portage-2.2.7